Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 AC041040.2-201ENST00000622926 2899 ntBASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM48Q8IWZ4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 AC232323.1-201ENST00000540724 2099 ntBASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 RN7SKP214-201ENST00000364208 315 ntBASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 AC009779.1-201ENST00000551138 283 ntBASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 CU633904.3-201ENST00000624042 1029 ntBASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIM48Q8IWZ4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 TMBIM7P-202ENST00000641474 1516 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AC078875.1-201ENST00000431907 724 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AP001505.2-201ENST00000616815 443 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 AC068587.10-201ENST00000641210 219 ntBASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIM48Q8IWZ4 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms