Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 MIR3615-201ENST00000581999 87 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 EEF1DP1-201ENST00000585891 896 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 AL022328.3-201ENST00000607943 679 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 CD8B2-202ENST00000417670 633 ntBASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 HOMER2P2-201ENST00000451621 847 ntBASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC104306.2-201ENST00000451877 341 ntBASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ACR-203ENST00000529621 708 ntTSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 C2orf69P2-201ENST00000562032 1123 ntBASIC9.67□□□□□ -0.86
SCXQ7RTU7 AP006547.1-201ENST00000563435 692 ntBASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 AC005695.3-201ENST00000614522 232 ntBASIC9.67□□□□□ -0.86
SCXQ7RTU7 CIC-204ENST00000572681 8218 ntTSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SCXQ7RTU7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SCXQ7RTU7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms