Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AC022364.1-202ENST00000617468 2409 ntBASIC13.61□□□□□ -0.23
LPCAT4Q643R3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AL589739.1-201ENST00000607720 493 ntBASIC13.61□□□□□ -0.23
LPCAT4Q643R3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AC004461.2-201ENST00000629517 803 ntBASIC13.61□□□□□ -0.23
LPCAT4Q643R3 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 AC064801.2-201ENST00000625052 1303 ntBASIC13.61□□□□□ -0.23
LPCAT4Q643R3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LPCAT4Q643R3 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 USP17L6P-201ENST00000382470 1197 ntBASIC13.6□□□□□ -0.23
LPCAT4Q643R3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 MIR940-201ENST00000401276 94 ntBASIC13.6□□□□□ -0.23
LPCAT4Q643R3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 LINC01165-201ENST00000445190 1623 ntBASIC13.6□□□□□ -0.23
LPCAT4Q643R3 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LPCAT4Q643R3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms