Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 AP006547.1-201ENST00000563435 692 ntBASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 NFIC-211ENST00000641145 8399 ntBASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.72■□□□□ 0.11
CDKAL1Q5VV42 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AC061965.1-201ENST00000560524 1465 ntBASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 CARS-214ENST00000529772 2637 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 CYP4F23P-201ENST00000593402 1579 ntBASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 HMGA1P1-201ENST00000415560 1062 ntBASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 RN7SL692P-201ENST00000464677 288 ntBASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AL355385.1-201ENST00000606123 409 ntBASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 RHOXF1P1-202ENST00000635473 501 ntBASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKAL1Q5VV42 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 AC108024.1-201ENST00000626286 1721 ntBASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.71■□□□□ 0.1
CDKAL1Q5VV42 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 BEND3P3-201ENST00000611030 2440 ntBASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKAL1Q5VV42 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms