Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AL354877.1-201ENST00000424412 413 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AL161932.2-201ENST00000435436 679 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AL645933.1-201ENST00000440087 609 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 KLF2P1-201ENST00000447438 1042 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AC134698.3-201ENST00000523880 214 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AC018635.2-201ENST00000608625 364 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AC079336.7-201ENST00000623428 1078 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AC064801.2-201ENST00000625052 1303 ntBASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HERC4Q5GLZ8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 GRK6P1-201ENST00000400595 1711 ntBASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 HSPB1P2-201ENST00000448722 546 ntBASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 AL162426.1-201ENST00000624141 743 ntBASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 HLA-C-210ENST00000640219 976 ntBASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HERC4Q5GLZ8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 AL008707.1-201ENST00000422498 534 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 SPTLC1P5-201ENST00000450718 252 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 AC104784.1-201ENST00000473096 294 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PRKXP1-201ENST00000561423 1122 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 FGFR3P5-201ENST00000564496 886 ntBASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HERC4Q5GLZ8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms