Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 FTLP1-201ENST00000449155 526 ntBASIC19.72■□□□□ 0.75
CDCA8Q53HL2 AC005740.1-201ENST00000515639 522 ntBASIC19.72■□□□□ 0.75
CDCA8Q53HL2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDCA8Q53HL2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 HSPA7-201ENST00000445535 1927 ntBASIC19.71■□□□□ 0.75
CDCA8Q53HL2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 LINC00265-2P-201ENST00000413372 782 ntBASIC19.71■□□□□ 0.75
CDCA8Q53HL2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 RPL18AP8-201ENST00000486071 528 ntBASIC19.71■□□□□ 0.75
CDCA8Q53HL2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 AC005632.3-201ENST00000605544 308 ntBASIC19.71■□□□□ 0.75
CDCA8Q53HL2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA8Q53HL2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 AC067931.2-201ENST00000623655 2003 ntBASIC19.7■□□□□ 0.74
CDCA8Q53HL2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 NDUFS6P1-201ENST00000485187 316 ntBASIC19.7■□□□□ 0.74
CDCA8Q53HL2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 AL021707.6-201ENST00000609212 491 ntBASIC19.7■□□□□ 0.74
CDCA8Q53HL2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 TEKT4P2-202ENST00000559466 1312 ntBASIC19.7■□□□□ 0.74
CDCA8Q53HL2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA8Q53HL2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms