Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNA1P78396 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCNA1P78396 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.23■□□□□ 0.19
CCNA1P78396 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNA1P78396 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCNA1P78396 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.22■□□□□ 0.19
CCNA1P78396 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 AC126755.1-201ENST00000525846 6405 ntBASIC16.22■□□□□ 0.19
CCNA1P78396 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCNA1P78396 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CCNA1P78396 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCNA1P78396 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CCNA1P78396 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.22■□□□□ 0.19
CCNA1P78396 AC092573.1-201ENST00000433054 884 ntBASIC16.22■□□□□ 0.19
CCNA1P78396 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.22■□□□□ 0.19
CCNA1P78396 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCNA1P78396 RN7SKP155-201ENST00000516031 288 ntBASIC16.22■□□□□ 0.19
CCNA1P78396 AC090136.2-201ENST00000517809 420 ntBASIC16.22■□□□□ 0.19
CCNA1P78396 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.22■□□□□ 0.19
CCNA1P78396 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.22■□□□□ 0.19
CCNA1P78396 HMGB1P24-201ENST00000611897 328 ntBASIC16.22■□□□□ 0.19
CCNA1P78396 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCNA1P78396 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCNA1P78396 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
CCNA1P78396 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CCNA1P78396 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 AC007952.5-201ENST00000572818 1486 ntBASIC16.22■□□□□ 0.19
CCNA1P78396 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCNA1P78396 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.22■□□□□ 0.19
CCNA1P78396 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNA1P78396 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCNA1P78396 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 AC073347.1-201ENST00000421633 2643 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.21■□□□□ 0.19
CCNA1P78396 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCNA1P78396 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.21■□□□□ 0.19
CCNA1P78396 MIR1301-201ENST00000408518 82 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 OR52M2P-201ENST00000414298 959 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.21■□□□□ 0.19
CCNA1P78396 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.21■□□□□ 0.19
CCNA1P78396 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.21■□□□□ 0.19
CCNA1P78396 PRSS3P1-201ENST00000503996 742 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.21■□□□□ 0.19
CCNA1P78396 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.21■□□□□ 0.19
CCNA1P78396 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 AC012158.2-201ENST00000536546 354 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCNA1P78396 GOLGA2P7-209ENST00000560408 745 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.21■□□□□ 0.19
CCNA1P78396 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.21■□□□□ 0.19
CCNA1P78396 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.21■□□□□ 0.19
CCNA1P78396 TRMT112P3-201ENST00000580149 358 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 AC012073.1-201ENST00000606114 1108 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 AC008972.2-201ENST00000606587 494 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 AL009176.1-201ENST00000607876 650 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 AC091769.1-201ENST00000619576 568 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCNA1P78396 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCNA1P78396 AL161772.1-201ENST00000610494 4412 ntBASIC16.21■□□□□ 0.19
CCNA1P78396 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCNA1P78396 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CCNA1P78396 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
CCNA1P78396 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCNA1P78396 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms