Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC8.14□□□□□ -1.11
RPS29P62273 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 KRT8P31-201ENST00000504812 1408 ntBASIC8.14□□□□□ -1.11
RPS29P62273 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 KRT18P9-201ENST00000604826 1300 ntBASIC8.14□□□□□ -1.11
RPS29P62273 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 AC026748.1-201ENST00000624349 3251 ntBASIC8.14□□□□□ -1.11
RPS29P62273 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 AL391647.1-201ENST00000395664 511 ntBASIC8.14□□□□□ -1.11
RPS29P62273 ISCA2P1-201ENST00000425548 448 ntBASIC8.14□□□□□ -1.11
RPS29P62273 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC8.14□□□□□ -1.11
RPS29P62273 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC8.14□□□□□ -1.11
RPS29P62273 STUB1-204ENST00000564370 875 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 ELP5-212ENST00000574255 671 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC8.14□□□□□ -1.11
RPS29P62273 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 MIR6799-201ENST00000620297 69 ntBASIC8.14□□□□□ -1.11
RPS29P62273 AC079336.7-201ENST00000623428 1078 ntBASIC8.14□□□□□ -1.11
RPS29P62273 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 AC012617.1-204ENST00000586340 2305 ntBASIC8.14□□□□□ -1.11
RPS29P62273 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 GOLGA8IP-202ENST00000611635 2100 ntBASIC8.14□□□□□ -1.11
RPS29P62273 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RPS29P62273 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RPS29P62273 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC8.14□□□□□ -1.11
RPS29P62273 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
RPS29P62273 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
RPS29P62273 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
RPS29P62273 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RPS29P62273 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC8.13□□□□□ -1.11
RPS29P62273 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 AL358781.1-202ENST00000321081 1360 ntBASIC8.13□□□□□ -1.11
RPS29P62273 BRD7P5-201ENST00000299197 1822 ntBASIC8.13□□□□□ -1.11
RPS29P62273 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC8.13□□□□□ -1.11
RPS29P62273 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RPS29P62273 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
RPS29P62273 CETP-203ENST00000566128 1733 ntTSL 5 BASIC8.13□□□□□ -1.11
RPS29P62273 MARK2P16-201ENST00000605714 1723 ntBASIC8.13□□□□□ -1.11
RPS29P62273 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RPS29P62273 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms