Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
AP1S1P61966 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.48□□□□□ -0.09
AP1S1P61966 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S1P61966 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP1S1P61966 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S1P61966 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.47□□□□□ -0.09
AP1S1P61966 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
AP1S1P61966 AC103592.1-201ENST00000394513 664 ntBASIC14.47□□□□□ -0.09
AP1S1P61966 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.47□□□□□ -0.09
AP1S1P61966 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.47□□□□□ -0.09
AP1S1P61966 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.47□□□□□ -0.09
AP1S1P61966 MIR3619-201ENST00000579667 83 ntBASIC14.47□□□□□ -0.09
AP1S1P61966 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S1P61966 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
AP1S1P61966 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
AP1S1P61966 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.47□□□□□ -0.09
AP1S1P61966 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.47□□□□□ -0.09
AP1S1P61966 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AP1S1P61966 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
AP1S1P61966 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 AL353637.1-201ENST00000451571 732 ntBASIC14.46□□□□□ -0.09
AP1S1P61966 DUX4L50-201ENST00000455245 715 ntBASIC14.46□□□□□ -0.09
AP1S1P61966 AC022494.1-201ENST00000466044 728 ntBASIC14.46□□□□□ -0.09
AP1S1P61966 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.46□□□□□ -0.09
AP1S1P61966 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.46□□□□□ -0.09
AP1S1P61966 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.46□□□□□ -0.09
AP1S1P61966 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.46□□□□□ -0.09
AP1S1P61966 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
AP1S1P61966 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 AC138627.1-207ENST00000641560 1006 ntBASIC14.46□□□□□ -0.09
AP1S1P61966 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AP1S1P61966 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.46□□□□□ -0.09
AP1S1P61966 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP1S1P61966 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AP1S1P61966 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP1S1P61966 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.46□□□□□ -0.1
AP1S1P61966 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.46□□□□□ -0.1
AP1S1P61966 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.46□□□□□ -0.1
AP1S1P61966 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP1S1P61966 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.46□□□□□ -0.1
AP1S1P61966 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.46□□□□□ -0.1
AP1S1P61966 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
AP1S1P61966 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
AP1S1P61966 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AP1S1P61966 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms