Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CKS1BP61024 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 REXO1L4P-201ENST00000605109 1937 ntBASIC10.23□□□□□ -0.77
CKS1BP61024 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CKS1BP61024 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC10.23□□□□□ -0.77
CKS1BP61024 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC10.23□□□□□ -0.77
CKS1BP61024 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CKS1BP61024 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.22□□□□□ -0.77
CKS1BP61024 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
CKS1BP61024 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.22□□□□□ -0.77
CKS1BP61024 HTR5BP-201ENST00000430851 1154 ntBASIC10.22□□□□□ -0.77
CKS1BP61024 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC10.22□□□□□ -0.77
CKS1BP61024 CEND1P1-201ENST00000451006 455 ntBASIC10.22□□□□□ -0.77
CKS1BP61024 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.22□□□□□ -0.77
CKS1BP61024 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AC152010.1-201ENST00000415779 2006 ntBASIC10.22□□□□□ -0.77
CKS1BP61024 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CKS1BP61024 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.22□□□□□ -0.77
CKS1BP61024 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
CKS1BP61024 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
CKS1BP61024 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC10.21□□□□□ -0.77
CKS1BP61024 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 CICP18-201ENST00000406017 2812 ntBASIC10.21□□□□□ -0.77
CKS1BP61024 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
CKS1BP61024 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
CKS1BP61024 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
CKS1BP61024 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC10.21□□□□□ -0.77
CKS1BP61024 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
CKS1BP61024 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CKS1BP61024 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms