Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.47□□□□□ -0.41
ACTBP60709 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.47□□□□□ -0.41
ACTBP60709 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ACTBP60709 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ACTBP60709 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ACTBP60709 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.47□□□□□ -0.41
ACTBP60709 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ACTBP60709 AL589987.1-201ENST00000453380 819 ntBASIC12.47□□□□□ -0.41
ACTBP60709 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 DOC2GP-202ENST00000514950 1163 ntBASIC12.47□□□□□ -0.41
ACTBP60709 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.47□□□□□ -0.41
ACTBP60709 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.47□□□□□ -0.41
ACTBP60709 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ACTBP60709 AL158212.4-201ENST00000624062 1286 ntBASIC12.47□□□□□ -0.41
ACTBP60709 PRSS30P-206ENST00000641773 873 ntBASIC12.47□□□□□ -0.41
ACTBP60709 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 REXO1L1P-201ENST00000379010 6598 ntBASIC12.47□□□□□ -0.41
ACTBP60709 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
ACTBP60709 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ACTBP60709 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ACTBP60709 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.47□□□□□ -0.41
ACTBP60709 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ACTBP60709 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.46□□□□□ -0.41
ACTBP60709 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.46□□□□□ -0.41
ACTBP60709 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.46□□□□□ -0.41
ACTBP60709 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ACTBP60709 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ACTBP60709 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.46□□□□□ -0.41
ACTBP60709 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 DLX4-206ENST00000611342 1662 ntBASIC12.46□□□□□ -0.41
ACTBP60709 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 AC136604.1-202ENST00000425471 771 ntBASIC12.46□□□□□ -0.41
ACTBP60709 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.46□□□□□ -0.41
ACTBP60709 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ACTBP60709 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.46□□□□□ -0.41
ACTBP60709 AC026410.3-201ENST00000514280 936 ntBASIC12.46□□□□□ -0.41
ACTBP60709 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.46□□□□□ -0.41
ACTBP60709 TPRX2P-201ENST00000535362 881 ntBASIC12.46□□□□□ -0.41
ACTBP60709 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
ACTBP60709 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms