Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 AC091812.2-201ENST00000619081 385 ntBASIC11.3□□□□□ -0.6
ERVFC1-1P60608 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.3□□□□□ -0.6
ERVFC1-1P60608 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.3□□□□□ -0.6
ERVFC1-1P60608 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC027796.2-201ENST00000575326 344 ntBASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AP002472.1-201ENST00000577490 586 ntBASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AL355385.1-201ENST00000606123 409 ntBASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
ERVFC1-1P60608 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms