Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HIST1H2BDP58876 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC091181.1-201ENST00000623762 2098 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC010336.1-201ENST00000539278 4739 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC092647.4-201ENST00000457211 535 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AL671277.2-201ENST00000458060 996 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 MSRA-206ENST00000521209 814 ntTSL 3 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 RARRES2P6-201ENST00000567333 442 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 RNF151-202ENST00000569210 853 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 AC069148.1-201ENST00000608741 768 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SNX21-213ENST00000614929 587 ntTSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 OACYLP-201ENST00000417918 2208 ntBASIC10.78□□□□□ -0.68
HIST1H2BDP58876 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.78□□□□□ -0.68
HIST1H2BDP58876 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
HIST1H2BDP58876 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 IGHV3-47-201ENST00000425060 335 ntBASIC10.77□□□□□ -0.69
HIST1H2BDP58876 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.77□□□□□ -0.69
HIST1H2BDP58876 AC106795.1-205ENST00000512851 1056 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms