Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN20P56880 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.29□□□□□ -0.28
CLDN20P56880 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.29□□□□□ -0.28
CLDN20P56880 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN20P56880 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN20P56880 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 DUX4L46-201ENST00000566845 751 ntBASIC13.29□□□□□ -0.28
CLDN20P56880 MIR4525-201ENST00000580000 75 ntBASIC13.29□□□□□ -0.28
CLDN20P56880 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 AC243960.2-201ENST00000600996 747 ntBASIC13.29□□□□□ -0.28
CLDN20P56880 AC008825.2-201ENST00000603374 718 ntBASIC13.29□□□□□ -0.28
CLDN20P56880 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN20P56880 AL008638.5-201ENST00000623814 1298 ntBASIC13.29□□□□□ -0.28
CLDN20P56880 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 AC007326.2-201ENST00000624224 7579 ntBASIC13.29□□□□□ -0.28
CLDN20P56880 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CLDN20P56880 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN20P56880 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CLDN20P56880 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN20P56880 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 POM121L10P-201ENST00000436994 1285 ntBASIC13.28□□□□□ -0.28
CLDN20P56880 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 CICP12-201ENST00000455801 843 ntBASIC13.28□□□□□ -0.28
CLDN20P56880 TPT1P11-201ENST00000458482 498 ntBASIC13.28□□□□□ -0.28
CLDN20P56880 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDN20P56880 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.28□□□□□ -0.28
CLDN20P56880 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDN20P56880 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDN20P56880 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.28□□□□□ -0.28
CLDN20P56880 AC132192.2-201ENST00000596206 1147 ntBASIC13.28□□□□□ -0.28
CLDN20P56880 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.28□□□□□ -0.28
CLDN20P56880 GPR182-203ENST00000622922 591 ntBASIC13.28□□□□□ -0.28
CLDN20P56880 AL162426.1-201ENST00000624141 743 ntBASIC13.28□□□□□ -0.28
CLDN20P56880 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN20P56880 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN20P56880 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN20P56880 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms