Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.84■□□□□ 0.13
PMS1P54277 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
PMS1P54277 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PMS1P54277 AC020658.7-201ENST00000624274 2442 ntBASIC15.84■□□□□ 0.13
PMS1P54277 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.84■□□□□ 0.13
PMS1P54277 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.84■□□□□ 0.13
PMS1P54277 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PMS1P54277 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PMS1P54277 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.83■□□□□ 0.13
PMS1P54277 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
PMS1P54277 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PMS1P54277 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PMS1P54277 AC005252.3-201ENST00000623855 2258 ntBASIC15.83■□□□□ 0.13
PMS1P54277 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PMS1P54277 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PMS1P54277 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.83■□□□□ 0.13
PMS1P54277 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.83■□□□□ 0.12
PMS1P54277 KRT18P36-201ENST00000411618 1276 ntBASIC15.83■□□□□ 0.12
PMS1P54277 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 AC079178.1-201ENST00000420915 656 ntBASIC15.83■□□□□ 0.12
PMS1P54277 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.83■□□□□ 0.12
PMS1P54277 HILS1-202ENST00000545329 423 ntBASIC15.83■□□□□ 0.12
PMS1P54277 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 AC005730.2-201ENST00000564549 1184 ntBASIC15.83■□□□□ 0.12
PMS1P54277 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.83■□□□□ 0.12
PMS1P54277 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PMS1P54277 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 AL137784.3-201ENST00000623858 2288 ntBASIC15.83■□□□□ 0.12
PMS1P54277 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PMS1P54277 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PMS1P54277 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PMS1P54277 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PMS1P54277 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.82■□□□□ 0.12
PMS1P54277 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 AC022210.1-201ENST00000449856 793 ntBASIC15.82■□□□□ 0.12
PMS1P54277 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.82■□□□□ 0.12
PMS1P54277 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.82■□□□□ 0.12
PMS1P54277 AC022217.1-201ENST00000521069 738 ntBASIC15.82■□□□□ 0.12
PMS1P54277 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.82■□□□□ 0.12
PMS1P54277 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.82■□□□□ 0.12
PMS1P54277 DUX4L45-201ENST00000566406 1057 ntBASIC15.82■□□□□ 0.12
PMS1P54277 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PMS1P54277 EEF1DP1-201ENST00000585891 896 ntBASIC15.82■□□□□ 0.12
PMS1P54277 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 AC021016.3-201ENST00000608367 477 ntBASIC15.82■□□□□ 0.12
PMS1P54277 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PMS1P54277 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.82■□□□□ 0.12
PMS1P54277 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms