Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.57□□□□□ -0.08
LIMK2P53671 AC004945.1-201ENST00000416738 983 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.57□□□□□ -0.08
LIMK2P53671 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 AC091804.1-201ENST00000486888 567 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 AP003171.2-201ENST00000528208 925 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.57□□□□□ -0.08
LIMK2P53671 PPY2P-201ENST00000582808 702 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 OR10B1P-201ENST00000601666 907 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 AC084346.2-201ENST00000607097 949 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 ZACNP1-201ENST00000612259 710 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK2P53671 FAM90A12P-201ENST00000519497 2375 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 FAM90A24P-201ENST00000520792 2369 ntBASIC14.57□□□□□ -0.08
LIMK2P53671 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LIMK2P53671 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.57□□□□□ -0.08
LIMK2P53671 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.57□□□□□ -0.08
LIMK2P53671 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LIMK2P53671 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.56□□□□□ -0.08
LIMK2P53671 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.56□□□□□ -0.08
LIMK2P53671 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.56□□□□□ -0.08
LIMK2P53671 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 AKR7A2P1-201ENST00000460134 915 ntBASIC14.56□□□□□ -0.08
LIMK2P53671 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 AC005586.2-201ENST00000563946 837 ntBASIC14.56□□□□□ -0.08
LIMK2P53671 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.56□□□□□ -0.08
LIMK2P53671 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.56□□□□□ -0.08
LIMK2P53671 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.56□□□□□ -0.08
LIMK2P53671 AC068587.10-201ENST00000641210 219 ntBASIC14.56□□□□□ -0.08
LIMK2P53671 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LIMK2P53671 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 AL022313.4-201ENST00000562756 2046 ntBASIC14.56□□□□□ -0.08
LIMK2P53671 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.56□□□□□ -0.08
LIMK2P53671 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIMK2P53671 AL137784.3-201ENST00000623858 2288 ntBASIC14.55□□□□□ -0.08
LIMK2P53671 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.55□□□□□ -0.08
LIMK2P53671 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIMK2P53671 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LIMK2P53671 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms