Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 KRT18P36-201ENST00000411618 1276 ntBASIC15.23■□□□□ 0.03
TUBP50607 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 AL133466.1-201ENST00000447582 150 ntBASIC15.23■□□□□ 0.03
TUBP50607 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 AC003686.1-201ENST00000550956 1034 ntBASIC15.23■□□□□ 0.03
TUBP50607 CHMP4BP1-201ENST00000556017 588 ntBASIC15.23■□□□□ 0.03
TUBP50607 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.23■□□□□ 0.03
TUBP50607 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 AGGF1P1-201ENST00000509500 2073 ntBASIC15.23■□□□□ 0.03
TUBP50607 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TUBP50607 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBP50607 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBP50607 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBP50607 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TUBP50607 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 ISCA2P1-201ENST00000425548 448 ntBASIC15.22■□□□□ 0.03
TUBP50607 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBP50607 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBP50607 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 AC090857.1-201ENST00000527400 390 ntBASIC15.22■□□□□ 0.03
TUBP50607 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBP50607 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 AC027237.1-201ENST00000560942 655 ntBASIC15.22■□□□□ 0.03
TUBP50607 AL157813.1-201ENST00000612996 587 ntBASIC15.22■□□□□ 0.03
TUBP50607 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.22■□□□□ 0.03
TUBP50607 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBP50607 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBP50607 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBP50607 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBP50607 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 KRT8P21-201ENST00000430398 1491 ntBASIC15.21■□□□□ 0.03
TUBP50607 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBP50607 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBP50607 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms