Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 AC097376.2-205ENST00000610159 5334 ntBASIC15.69■□□□□ 0.1
CASP4P49662 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP4P49662 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.69■□□□□ 0.1
CASP4P49662 ZNF767P-206ENST00000513792 565 ntBASIC15.69■□□□□ 0.1
CASP4P49662 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP4P49662 AL451050.2-201ENST00000606967 682 ntBASIC15.69■□□□□ 0.1
CASP4P49662 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CASP4P49662 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CASP4P49662 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP4P49662 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP4P49662 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CASP4P49662 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP4P49662 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP4P49662 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 AL365181.3-201ENST00000605886 3222 ntBASIC15.68■□□□□ 0.1
CASP4P49662 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CASP4P49662 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 AC244107.1-201ENST00000442033 332 ntBASIC15.68■□□□□ 0.1
CASP4P49662 PFN1P12-201ENST00000455938 534 ntBASIC15.68■□□□□ 0.1
CASP4P49662 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 AC126915.1-201ENST00000522847 1038 ntBASIC15.68■□□□□ 0.1
CASP4P49662 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 RN7SL163P-201ENST00000583100 276 ntBASIC15.68■□□□□ 0.1
CASP4P49662 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.68■□□□□ 0.1
CASP4P49662 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.68■□□□□ 0.1
CASP4P49662 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.68■□□□□ 0.1
CASP4P49662 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CASP4P49662 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASP4P49662 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.68■□□□□ 0.1
CASP4P49662 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CASP4P49662 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CASP4P49662 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASP4P49662 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms