Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AL928654.5-201ENST00000624831 2501 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AL122018.1-201ENST00000446607 2310 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC1A1P43005 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SLC1A1P43005 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC1A1P43005 BOLA2P3-201ENST00000404566 256 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AC100850.1-201ENST00000506768 649 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC1A1P43005 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SLC1A1P43005 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AC124068.2-201ENST00000569473 1109 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AC008687.7-202ENST00000637404 953 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC1A1P43005 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC1A1P43005 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC1A1P43005 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC1A1P43005 MARK2P9-201ENST00000430958 1727 ntBASIC15.09■□□□□ 0.01
SLC1A1P43005 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC1A1P43005 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC1A1P43005 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC1A1P43005 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC1A1P43005 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC1A1P43005 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC1A1P43005 AC007952.5-201ENST00000572818 1486 ntBASIC15.08■□□□□ 0.01
SLC1A1P43005 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
SLC1A1P43005 TCAF1P1-201ENST00000414990 2232 ntBASIC15.08■□□□□ 0
SLC1A1P43005 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.08■□□□□ 0
SLC1A1P43005 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.08■□□□□ 0
SLC1A1P43005 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.08■□□□□ 0
SLC1A1P43005 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.08■□□□□ 0
SLC1A1P43005 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.08■□□□□ 0
SLC1A1P43005 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 AC012441.2-201ENST00000444843 739 ntBASIC15.08■□□□□ 0
SLC1A1P43005 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.08■□□□□ 0
SLC1A1P43005 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.08■□□□□ 0
SLC1A1P43005 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.08■□□□□ 0
SLC1A1P43005 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.08■□□□□ 0
SLC1A1P43005 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.08■□□□□ 0
SLC1A1P43005 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 AC079781.5-202ENST00000641784 3743 ntBASIC15.08■□□□□ 0
SLC1A1P43005 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.08■□□□□ 0
SLC1A1P43005 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.08■□□□□ 0
SLC1A1P43005 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.08■□□□□ 0
SLC1A1P43005 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC1A1P43005 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 CCT8L1P-201ENST00000465400 1674 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms