Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CEACAM3P40198 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CEACAM3P40198 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.84□□□□□ -0.51
CEACAM3P40198 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.84□□□□□ -0.51
CEACAM3P40198 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.84□□□□□ -0.51
CEACAM3P40198 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC11.84□□□□□ -0.51
CEACAM3P40198 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.84□□□□□ -0.51
CEACAM3P40198 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.84□□□□□ -0.51
CEACAM3P40198 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.84□□□□□ -0.51
CEACAM3P40198 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 AL096828.3-201ENST00000615354 462 ntBASIC11.84□□□□□ -0.51
CEACAM3P40198 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CEACAM3P40198 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.84□□□□□ -0.51
CEACAM3P40198 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CEACAM3P40198 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CEACAM3P40198 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CEACAM3P40198 AC090505.1-201ENST00000430515 1834 ntBASIC11.83□□□□□ -0.51
CEACAM3P40198 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.83□□□□□ -0.52
CEACAM3P40198 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 AL591846.1-201ENST00000451736 433 ntBASIC11.83□□□□□ -0.52
CEACAM3P40198 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 RN7SL163P-201ENST00000583100 276 ntBASIC11.83□□□□□ -0.52
CEACAM3P40198 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.83□□□□□ -0.52
CEACAM3P40198 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 AC133540.1-201ENST00000620845 1019 ntBASIC11.83□□□□□ -0.52
CEACAM3P40198 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CEACAM3P40198 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CEACAM3P40198 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.83□□□□□ -0.52
CEACAM3P40198 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms