Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCLP35914 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCLP35914 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCLP35914 MIR3615-201ENST00000581999 87 ntBASIC14.31□□□□□ -0.12
HMGCLP35914 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMGCLP35914 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 AC244093.1-201ENST00000610837 814 ntBASIC14.31□□□□□ -0.12
HMGCLP35914 BAP1-211ENST00000615113 489 ntBASIC14.31□□□□□ -0.12
HMGCLP35914 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGCLP35914 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGCLP35914 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMGCLP35914 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HMGCLP35914 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCLP35914 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGCLP35914 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 AL359881.3-201ENST00000602640 1721 ntBASIC14.3□□□□□ -0.12
HMGCLP35914 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HMGCLP35914 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCLP35914 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCLP35914 AC099548.2-209ENST00000480264 625 ntBASIC14.3□□□□□ -0.12
HMGCLP35914 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCLP35914 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HMGCLP35914 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.3□□□□□ -0.12
HMGCLP35914 AC093752.3-201ENST00000567343 901 ntBASIC14.3□□□□□ -0.12
HMGCLP35914 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 NDUFV2P1-201ENST00000596415 907 ntBASIC14.3□□□□□ -0.12
HMGCLP35914 AL022334.2-201ENST00000610000 484 ntBASIC14.3□□□□□ -0.12
HMGCLP35914 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 LINC01815-202ENST00000641468 1409 ntBASIC14.3□□□□□ -0.12
HMGCLP35914 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCLP35914 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCLP35914 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HMGCLP35914 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGCLP35914 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HMGCLP35914 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGCLP35914 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCLP35914 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms