Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
COPB2P35606 AC117489.1-201ENST00000625169 3217 ntBASIC16.42■□□□□ 0.22
COPB2P35606 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.42■□□□□ 0.22
COPB2P35606 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COPB2P35606 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.42■□□□□ 0.22
COPB2P35606 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.42■□□□□ 0.22
COPB2P35606 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.42■□□□□ 0.22
COPB2P35606 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COPB2P35606 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.42■□□□□ 0.22
COPB2P35606 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPB2P35606 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.41■□□□□ 0.22
COPB2P35606 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 AC006987.1-201ENST00000413610 527 ntBASIC16.41■□□□□ 0.22
COPB2P35606 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.41■□□□□ 0.22
COPB2P35606 DPY19L2P5-201ENST00000456300 331 ntBASIC16.41■□□□□ 0.22
COPB2P35606 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COPB2P35606 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.41■□□□□ 0.22
COPB2P35606 RNA5SP417-201ENST00000516459 108 ntBASIC16.41■□□□□ 0.22
COPB2P35606 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.41■□□□□ 0.22
COPB2P35606 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.41■□□□□ 0.22
COPB2P35606 NDUFB10P1-201ENST00000567319 521 ntBASIC16.41■□□□□ 0.22
COPB2P35606 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COPB2P35606 AL133467.4-201ENST00000602953 725 ntBASIC16.41■□□□□ 0.22
COPB2P35606 AC140113.1-201ENST00000603467 169 ntBASIC16.41■□□□□ 0.22
COPB2P35606 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COPB2P35606 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.41■□□□□ 0.22
COPB2P35606 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.41■□□□□ 0.22
COPB2P35606 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
COPB2P35606 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
COPB2P35606 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPB2P35606 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 AC006372.4-201ENST00000624122 1543 ntBASIC16.4■□□□□ 0.22
COPB2P35606 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 FGD5P1-202ENST00000614866 2498 ntBASIC16.4■□□□□ 0.22
COPB2P35606 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
COPB2P35606 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 BAK1P1-201ENST00000317045 636 ntBASIC16.4■□□□□ 0.22
COPB2P35606 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.4■□□□□ 0.22
COPB2P35606 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.4■□□□□ 0.22
COPB2P35606 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.4■□□□□ 0.22
COPB2P35606 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.4■□□□□ 0.22
COPB2P35606 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.4■□□□□ 0.22
COPB2P35606 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.4■□□□□ 0.22
COPB2P35606 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.4■□□□□ 0.22
COPB2P35606 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.4■□□□□ 0.22
COPB2P35606 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.4■□□□□ 0.22
COPB2P35606 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.4■□□□□ 0.22
COPB2P35606 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.4■□□□□ 0.22
COPB2P35606 AGGF1P1-201ENST00000509500 2073 ntBASIC16.4■□□□□ 0.22
COPB2P35606 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.4■□□□□ 0.22
COPB2P35606 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPB2P35606 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms