Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA3P32297 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA3P32297 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 CLUHP2-201ENST00000426660 1303 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 AL590440.2-201ENST00000641973 1595 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNA3P32297 CNN2P10-201ENST00000443067 918 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 HOMER2P2-201ENST00000451621 847 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 COX5BP1-201ENST00000507622 393 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNA3P32297 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CHRNA3P32297 C2orf69P2-201ENST00000562032 1123 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNA3P32297 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 OR10B1P-201ENST00000601666 907 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 BX088702.1-201ENST00000610784 235 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRNA3P32297 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA3P32297 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 AC138969.2-201ENST00000532739 9932 ntBASIC15.25■□□□□ 0.03
CHRNA3P32297 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA3P32297 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA3P32297 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNA3P32297 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNA3P32297 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 MESTP3-201ENST00000503460 968 ntBASIC15.24■□□□□ 0.03
CHRNA3P32297 FTLP10-202ENST00000505798 471 ntBASIC15.24■□□□□ 0.03
CHRNA3P32297 AL391280.1-201ENST00000506969 1062 ntBASIC15.24■□□□□ 0.03
CHRNA3P32297 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRNA3P32297 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 AC138466.3-201ENST00000619983 221 ntBASIC15.24■□□□□ 0.03
CHRNA3P32297 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNA3P32297 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA3P32297 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 AC072061.1-201ENST00000569710 2234 ntBASIC15.24■□□□□ 0.03
CHRNA3P32297 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA3P32297 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA3P32297 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA3P32297 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms