Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.88□□□□□ -0.19
HTR1EP28566 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.88□□□□□ -0.19
HTR1EP28566 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HTR1EP28566 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 C2orf27AP3-201ENST00000434123 579 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HTR1EP28566 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.88□□□□□ -0.19
HTR1EP28566 DUX4L45-201ENST00000566406 1057 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 AP001063.1-201ENST00000568332 529 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 AC244669.2-201ENST00000612320 853 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.88□□□□□ -0.19
HTR1EP28566 AL354718.3-201ENST00000616414 581 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 CR382287.1-201ENST00000623954 586 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 AC008687.7-202ENST00000637404 953 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 NCLP1-201ENST00000445357 1963 ntBASIC13.88□□□□□ -0.19
HTR1EP28566 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.88□□□□□ -0.19
HTR1EP28566 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HTR1EP28566 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HTR1EP28566 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
HTR1EP28566 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HTR1EP28566 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.87□□□□□ -0.19
HTR1EP28566 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
HTR1EP28566 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HTR1EP28566 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.87□□□□□ -0.19
HTR1EP28566 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 RNU1-114P-201ENST00000365297 166 ntBASIC13.87□□□□□ -0.19
HTR1EP28566 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.87□□□□□ -0.19
HTR1EP28566 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.87□□□□□ -0.19
HTR1EP28566 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.87□□□□□ -0.19
HTR1EP28566 IGHJ2P-201ENST00000454480 60 ntBASIC13.87□□□□□ -0.19
HTR1EP28566 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.87□□□□□ -0.19
HTR1EP28566 RNA5SP423-201ENST00000517127 109 ntBASIC13.87□□□□□ -0.19
HTR1EP28566 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.87□□□□□ -0.19
HTR1EP28566 AC023310.1-201ENST00000554836 735 ntBASIC13.87□□□□□ -0.19
HTR1EP28566 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.87□□□□□ -0.19
HTR1EP28566 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.87□□□□□ -0.19
HTR1EP28566 CLUHP6-201ENST00000580789 941 ntBASIC13.87□□□□□ -0.19
HTR1EP28566 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.87□□□□□ -0.19
HTR1EP28566 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.87□□□□□ -0.19
HTR1EP28566 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.87□□□□□ -0.19
HTR1EP28566 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.87□□□□□ -0.19
HTR1EP28566 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HTR1EP28566 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms