Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.33□□□□□ -0.12
VARSP26640 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
VARSP26640 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VARSP26640 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VARSP26640 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VARSP26640 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VARSP26640 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 MIR1247-201ENST00000408206 136 ntBASIC14.32□□□□□ -0.12
VARSP26640 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 CNN2P8-201ENST00000421872 913 ntBASIC14.32□□□□□ -0.12
VARSP26640 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 FAM8A4P-201ENST00000435433 1213 ntBASIC14.32□□□□□ -0.12
VARSP26640 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 AC108725.1-201ENST00000495472 409 ntBASIC14.32□□□□□ -0.12
VARSP26640 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.32□□□□□ -0.12
VARSP26640 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 AC243960.2-201ENST00000600996 747 ntBASIC14.32□□□□□ -0.12
VARSP26640 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.32□□□□□ -0.12
VARSP26640 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 AC016397.2-201ENST00000624848 1985 ntBASIC14.32□□□□□ -0.12
VARSP26640 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.32□□□□□ -0.12
VARSP26640 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VARSP26640 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
VARSP26640 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VARSP26640 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VARSP26640 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VARSP26640 AC019294.4-201ENST00000561777 2905 ntBASIC14.31□□□□□ -0.12
VARSP26640 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VARSP26640 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.31□□□□□ -0.12
VARSP26640 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VARSP26640 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.31□□□□□ -0.12
VARSP26640 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VARSP26640 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VARSP26640 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VARSP26640 RN7SKP175-201ENST00000408472 289 ntBASIC14.31□□□□□ -0.12
VARSP26640 AC006033.1-201ENST00000440505 426 ntBASIC14.31□□□□□ -0.12
VARSP26640 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VARSP26640 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.31□□□□□ -0.12
VARSP26640 AC099548.2-209ENST00000480264 625 ntBASIC14.31□□□□□ -0.12
VARSP26640 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.31□□□□□ -0.12
VARSP26640 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.31□□□□□ -0.12
VARSP26640 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.31□□□□□ -0.12
VARSP26640 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.31□□□□□ -0.12
VARSP26640 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.31□□□□□ -0.12
VARSP26640 AL022328.3-201ENST00000607943 679 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms