Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 CCT8L1P-201ENST00000465400 1674 ntBASIC14.69□□□□□ -0.06
PTPN3P26045 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.69□□□□□ -0.06
PTPN3P26045 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
PTPN3P26045 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.69□□□□□ -0.06
PTPN3P26045 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.69□□□□□ -0.06
PTPN3P26045 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 BNIP3P13-201ENST00000599968 566 ntBASIC14.69□□□□□ -0.06
PTPN3P26045 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 AP000346.4-201ENST00000614827 381 ntBASIC14.69□□□□□ -0.06
PTPN3P26045 AL023803.2-201ENST00000620080 638 ntBASIC14.69□□□□□ -0.06
PTPN3P26045 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.69□□□□□ -0.06
PTPN3P26045 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PTPN3P26045 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTPN3P26045 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN3P26045 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 ST20-AS1-201ENST00000560255 4223 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN3P26045 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PTPN3P26045 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 AL591846.1-201ENST00000451736 433 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 HLA-J-204ENST00000495278 958 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN3P26045 AC005695.3-201ENST00000614522 232 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 AC022748.3-201ENST00000621828 275 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 AL591471.1-201ENST00000621855 229 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN3P26045 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN3P26045 AC018629.1-201ENST00000623381 1736 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN3P26045 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PTPN3P26045 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN3P26045 AC130686.1-201ENST00000622936 2466 ntBASIC14.68□□□□□ -0.06
PTPN3P26045 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms