Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.59□□□□□ -0.07
XPAP23025 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.59□□□□□ -0.07
XPAP23025 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.59□□□□□ -0.07
XPAP23025 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
XPAP23025 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.59□□□□□ -0.07
XPAP23025 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
XPAP23025 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
XPAP23025 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
XPAP23025 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
XPAP23025 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
XPAP23025 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 AL136379.1-201ENST00000623471 2642 ntBASIC14.58□□□□□ -0.08
XPAP23025 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
XPAP23025 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 PGAM1P5-201ENST00000548011 764 ntBASIC14.58□□□□□ -0.08
XPAP23025 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.58□□□□□ -0.08
XPAP23025 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
XPAP23025 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
XPAP23025 AL591471.1-201ENST00000621855 229 ntBASIC14.58□□□□□ -0.08
XPAP23025 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.58□□□□□ -0.08
XPAP23025 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.58□□□□□ -0.08
XPAP23025 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
XPAP23025 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.58□□□□□ -0.08
XPAP23025 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
XPAP23025 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
XPAP23025 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
XPAP23025 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.57□□□□□ -0.08
XPAP23025 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
XPAP23025 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 XBP1P1-201ENST00000436573 652 ntBASIC14.57□□□□□ -0.08
XPAP23025 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
XPAP23025 AL157813.1-201ENST00000612996 587 ntBASIC14.57□□□□□ -0.08
XPAP23025 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 AL390755.1-201ENST00000623716 2027 ntBASIC14.57□□□□□ -0.08
XPAP23025 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.57□□□□□ -0.08
XPAP23025 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.57□□□□□ -0.08
XPAP23025 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
XPAP23025 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms