Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RN7SL838P-201ENST00000481676 295 ntBASIC23.66■■□□□ 1.38
CFTRP13569 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC23.66■■□□□ 1.38
CFTRP13569 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC23.66■■□□□ 1.38
CFTRP13569 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC23.66■■□□□ 1.38
CFTRP13569 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC23.66■■□□□ 1.38
CFTRP13569 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC23.66■■□□□ 1.38
CFTRP13569 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC23.66■■□□□ 1.38
CFTRP13569 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC23.66■■□□□ 1.38
CFTRP13569 PCTP-206ENST00000573500 919 ntTSL 3 BASIC23.66■■□□□ 1.38
CFTRP13569 RN7SL300P-201ENST00000582522 318 ntBASIC23.66■■□□□ 1.38
CFTRP13569 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC23.66■■□□□ 1.38
CFTRP13569 AC112220.4-201ENST00000604982 1263 ntBASIC23.66■■□□□ 1.38
CFTRP13569 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC23.66■■□□□ 1.38
CFTRP13569 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CFTRP13569 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.66■■□□□ 1.38
CFTRP13569 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFTRP13569 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC23.65■■□□□ 1.38
CFTRP13569 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
CFTRP13569 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC23.65■■□□□ 1.38
CFTRP13569 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 AC093106.1-201ENST00000437271 352 ntBASIC23.65■■□□□ 1.38
CFTRP13569 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC23.65■■□□□ 1.38
CFTRP13569 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC23.65■■□□□ 1.38
CFTRP13569 TPST2P1-201ENST00000564073 1102 ntBASIC23.65■■□□□ 1.38
CFTRP13569 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC23.65■■□□□ 1.38
CFTRP13569 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC23.65■■□□□ 1.38
CFTRP13569 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 AL031590.1-202ENST00000641466 1737 ntBASIC23.65■■□□□ 1.38
CFTRP13569 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC23.65■■□□□ 1.38
CFTRP13569 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CFTRP13569 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC23.64■■□□□ 1.38
CFTRP13569 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CFTRP13569 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC23.64■■□□□ 1.38
CFTRP13569 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CFTRP13569 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CFTRP13569 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CFTRP13569 RBMXP1-201ENST00000408004 1191 ntBASIC23.64■■□□□ 1.38
CFTRP13569 BX088651.3-201ENST00000418155 352 ntBASIC23.64■■□□□ 1.38
CFTRP13569 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC23.64■■□□□ 1.38
CFTRP13569 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CFTRP13569 RNASEH2CP1-201ENST00000454281 502 ntBASIC23.64■■□□□ 1.38
CFTRP13569 AC113398.1-201ENST00000464124 406 ntBASIC23.64■■□□□ 1.38
CFTRP13569 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC23.64■■□□□ 1.38
CFTRP13569 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC23.64■■□□□ 1.38
CFTRP13569 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC23.64■■□□□ 1.38
CFTRP13569 MIR3940-201ENST00000579148 102 ntBASIC23.64■■□□□ 1.38
CFTRP13569 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC23.64■■□□□ 1.38
CFTRP13569 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC23.64■■□□□ 1.38
CFTRP13569 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC23.64■■□□□ 1.38
CFTRP13569 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CFTRP13569 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC23.64■■□□□ 1.38
CFTRP13569 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CFTRP13569 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 FES-203ENST00000394302 2133 ntTSL 5 BASIC23.64■■□□□ 1.37
CFTRP13569 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC23.64■■□□□ 1.37
CFTRP13569 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC23.64■■□□□ 1.37
CFTRP13569 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CFTRP13569 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CFTRP13569 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC23.64■■□□□ 1.37
CFTRP13569 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC23.64■■□□□ 1.37
CFTRP13569 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC23.64■■□□□ 1.37
CFTRP13569 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC23.64■■□□□ 1.37
CFTRP13569 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFTRP13569 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC23.63■■□□□ 1.37
CFTRP13569 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC23.63■■□□□ 1.37
CFTRP13569 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC23.63■■□□□ 1.37
CFTRP13569 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFTRP13569 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CFTRP13569 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CFTRP13569 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CFTRP13569 AP001331.1-201ENST00000413008 1015 ntBASIC23.63■■□□□ 1.37
CFTRP13569 RBM14-205ENST00000443702 732 ntTSL 3 BASIC23.63■■□□□ 1.37
CFTRP13569 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC23.63■■□□□ 1.37
CFTRP13569 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC23.63■■□□□ 1.37
CFTRP13569 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CFTRP13569 CICP14-201ENST00000629111 2732 ntBASIC23.63■■□□□ 1.37
CFTRP13569 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFTRP13569 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CFTRP13569 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFTRP13569 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CFTRP13569 AC034205.3-201ENST00000603595 1376 ntBASIC23.63■■□□□ 1.37
CFTRP13569 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms