Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 GCSHP3-201ENST00000431120 391 ntBASIC13.47□□□□□ -0.25
CCL4P13236 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 RN7SL788P-201ENST00000460504 316 ntBASIC13.47□□□□□ -0.25
CCL4P13236 RN7SL23P-201ENST00000484055 275 ntBASIC13.47□□□□□ -0.25
CCL4P13236 RN7SL767P-201ENST00000493013 295 ntBASIC13.47□□□□□ -0.25
CCL4P13236 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 PGAM1P12-201ENST00000505622 748 ntBASIC13.47□□□□□ -0.25
CCL4P13236 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL4P13236 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL4P13236 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 AL118522.1-201ENST00000611368 560 ntBASIC13.47□□□□□ -0.25
CCL4P13236 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 AC073592.2-201ENST00000623062 780 ntBASIC13.47□□□□□ -0.25
CCL4P13236 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCL4P13236 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL4P13236 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL4P13236 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCL4P13236 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.46□□□□□ -0.25
CCL4P13236 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 CTBP2P8-201ENST00000422584 1330 ntBASIC13.46□□□□□ -0.25
CCL4P13236 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CCL4P13236 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.46□□□□□ -0.25
CCL4P13236 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 RN7SL375P-201ENST00000492442 298 ntBASIC13.46□□□□□ -0.25
CCL4P13236 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL4P13236 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL4P13236 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.46□□□□□ -0.25
CCL4P13236 AC011247.3-201ENST00000603297 438 ntBASIC13.46□□□□□ -0.25
CCL4P13236 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.46□□□□□ -0.25
CCL4P13236 AC002472.4-201ENST00000641915 272 ntBASIC13.46□□□□□ -0.25
CCL4P13236 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL4P13236 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL4P13236 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL4P13236 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL4P13236 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL4P13236 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
CCL4P13236 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
CCL4P13236 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL4P13236 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
CCL4P13236 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CCL4P13236 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL4P13236 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL4P13236 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL4P13236 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CCL4P13236 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL4P13236 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL4P13236 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
CCL4P13236 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CCL4P13236 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms