Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 OR8S1-201ENST00000310194 1080 ntBASIC14.92□□□□□ -0.02
CD48P09326 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD48P09326 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.92□□□□□ -0.02
CD48P09326 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 VDAC1P1-201ENST00000439229 848 ntBASIC14.92□□□□□ -0.02
CD48P09326 OR2R1P-201ENST00000441404 914 ntBASIC14.92□□□□□ -0.02
CD48P09326 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.92□□□□□ -0.02
CD48P09326 AC022217.1-201ENST00000521069 738 ntBASIC14.92□□□□□ -0.02
CD48P09326 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 AC133540.1-201ENST00000620845 1019 ntBASIC14.92□□□□□ -0.02
CD48P09326 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 CCT8L1P-201ENST00000465400 1674 ntBASIC14.92□□□□□ -0.02
CD48P09326 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD48P09326 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD48P09326 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD48P09326 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD48P09326 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD48P09326 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CD48P09326 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD48P09326 AL365209.1-201ENST00000624418 6473 ntBASIC14.91□□□□□ -0.02
CD48P09326 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD48P09326 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.91□□□□□ -0.02
CD48P09326 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 FAM58BP-201ENST00000439056 645 ntBASIC14.91□□□□□ -0.02
CD48P09326 ATP5G2P4-201ENST00000442175 420 ntBASIC14.91□□□□□ -0.02
CD48P09326 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.91□□□□□ -0.02
CD48P09326 PGAM1P5-201ENST00000548011 764 ntBASIC14.91□□□□□ -0.02
CD48P09326 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 AL583810.1-201ENST00000553344 1045 ntBASIC14.91□□□□□ -0.02
CD48P09326 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.91□□□□□ -0.02
CD48P09326 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.91□□□□□ -0.02
CD48P09326 AC005324.6-201ENST00000587972 613 ntBASIC14.91□□□□□ -0.02
CD48P09326 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.91□□□□□ -0.02
CD48P09326 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
CD48P09326 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD48P09326 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CD48P09326 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD48P09326 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD48P09326 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CD48P09326 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms