Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RETP07949 MTHFR-210ENST00000641407 2387 ntBASIC14.53□□□□□ -0.08
RETP07949 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RETP07949 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.53□□□□□ -0.08
RETP07949 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.53□□□□□ -0.08
RETP07949 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
RETP07949 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.53□□□□□ -0.08
RETP07949 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 MARK2P16-201ENST00000605714 1723 ntBASIC14.53□□□□□ -0.08
RETP07949 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 CYP4F23P-201ENST00000593402 1579 ntBASIC14.53□□□□□ -0.08
RETP07949 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 FAM90A21P-201ENST00000510875 1396 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A15P-201ENST00000514465 1395 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A6P-201ENST00000515148 1394 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A16P-201ENST00000526662 1395 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A9P-201ENST00000527940 1395 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A5P-201ENST00000528738 1395 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A14P-201ENST00000530386 1395 ntBASIC14.53□□□□□ -0.08
RETP07949 FAM90A13P-201ENST00000534703 1395 ntBASIC14.53□□□□□ -0.08
RETP07949 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.53□□□□□ -0.08
RETP07949 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 AL645933.1-201ENST00000440087 609 ntBASIC14.53□□□□□ -0.08
RETP07949 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.53□□□□□ -0.08
RETP07949 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.53□□□□□ -0.08
RETP07949 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RETP07949 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.53□□□□□ -0.08
RETP07949 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.53□□□□□ -0.08
RETP07949 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.53□□□□□ -0.08
RETP07949 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 EIF5AP2-201ENST00000585668 1047 ntBASIC14.53□□□□□ -0.08
RETP07949 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 AL451007.2-201ENST00000632004 563 ntBASIC14.53□□□□□ -0.08
RETP07949 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RETP07949 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.53□□□□□ -0.08
RETP07949 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.53□□□□□ -0.08
RETP07949 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.53□□□□□ -0.08
RETP07949 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RETP07949 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RETP07949 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
RETP07949 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 AC041040.2-201ENST00000622926 2899 ntBASIC14.52□□□□□ -0.08
RETP07949 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.52□□□□□ -0.08
RETP07949 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
RETP07949 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.52□□□□□ -0.08
RETP07949 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RETP07949 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RETP07949 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RETP07949 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RETP07949 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.52□□□□□ -0.09
RETP07949 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.52□□□□□ -0.09
RETP07949 RN7SL396P-201ENST00000471086 295 ntBASIC14.52□□□□□ -0.09
RETP07949 FAM86B3P-203ENST00000523992 854 ntBASIC14.52□□□□□ -0.09
RETP07949 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
RETP07949 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
RETP07949 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
RETP07949 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.52□□□□□ -0.09
RETP07949 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.52□□□□□ -0.09
RETP07949 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.52□□□□□ -0.09
RETP07949 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RETP07949 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.52□□□□□ -0.09
RETP07949 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.52□□□□□ -0.09
RETP07949 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RETP07949 AC006504.5-208ENST00000588784 2401 ntBASIC14.52□□□□□ -0.09
RETP07949 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.52□□□□□ -0.09
RETP07949 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RETP07949 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RETP07949 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RETP07949 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms