Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COL5A2P05997 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.35■□□□□ 0.53
COL5A2P05997 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.35■□□□□ 0.53
COL5A2P05997 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
COL5A2P05997 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.35■□□□□ 0.53
COL5A2P05997 DPY19L2P4-201ENST00000479881 442 ntBASIC18.35■□□□□ 0.53
COL5A2P05997 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.35■□□□□ 0.53
COL5A2P05997 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC18.35■□□□□ 0.53
COL5A2P05997 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC18.35■□□□□ 0.53
COL5A2P05997 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC18.35■□□□□ 0.53
COL5A2P05997 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC18.35■□□□□ 0.53
COL5A2P05997 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC18.35■□□□□ 0.53
COL5A2P05997 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 TUBB8P4-201ENST00000511806 1324 ntBASIC18.35■□□□□ 0.53
COL5A2P05997 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.35■□□□□ 0.53
COL5A2P05997 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.35■□□□□ 0.53
COL5A2P05997 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL5A2P05997 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC18.34■□□□□ 0.53
COL5A2P05997 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 RPL14-203ENST00000416518 812 ntTSL 3 BASIC18.34■□□□□ 0.53
COL5A2P05997 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 AC093700.1-201ENST00000503348 717 ntBASIC18.34■□□□□ 0.53
COL5A2P05997 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC18.34■□□□□ 0.53
COL5A2P05997 CCND3P2-201ENST00000579393 537 ntBASIC18.34■□□□□ 0.53
COL5A2P05997 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC18.34■□□□□ 0.53
COL5A2P05997 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL5A2P05997 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL5A2P05997 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.34■□□□□ 0.53
COL5A2P05997 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.34■□□□□ 0.53
COL5A2P05997 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
COL5A2P05997 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL5A2P05997 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.33■□□□□ 0.53
COL5A2P05997 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.33■□□□□ 0.53
COL5A2P05997 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL5A2P05997 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COL5A2P05997 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
COL5A2P05997 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL5A2P05997 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.33■□□□□ 0.53
COL5A2P05997 SNRPD2P2-201ENST00000473818 333 ntBASIC18.33■□□□□ 0.53
COL5A2P05997 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC18.33■□□□□ 0.53
COL5A2P05997 AC010202.1-201ENST00000551181 405 ntBASIC18.33■□□□□ 0.53
COL5A2P05997 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC18.33■□□□□ 0.53
COL5A2P05997 AC009041.4-201ENST00000620075 638 ntBASIC18.33■□□□□ 0.53
COL5A2P05997 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL5A2P05997 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL5A2P05997 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.33■□□□□ 0.53
COL5A2P05997 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL5A2P05997 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.33■□□□□ 0.52
COL5A2P05997 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL5A2P05997 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC18.33■□□□□ 0.52
COL5A2P05997 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC18.33■□□□□ 0.52
COL5A2P05997 CD37-203ENST00000426897 1204 ntTSL 2 BASIC18.33■□□□□ 0.52
COL5A2P05997 AC006328.1-201ENST00000437571 379 ntBASIC18.33■□□□□ 0.52
COL5A2P05997 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.33■□□□□ 0.52
COL5A2P05997 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC18.33■□□□□ 0.52
COL5A2P05997 AP000533.1-201ENST00000456143 1177 ntBASIC18.33■□□□□ 0.52
COL5A2P05997 MARK2P17-201ENST00000498560 841 ntBASIC18.33■□□□□ 0.52
COL5A2P05997 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC18.33■□□□□ 0.52
COL5A2P05997 MBP-230ENST00000528160 584 ntTSL 5 BASIC18.33■□□□□ 0.52
COL5A2P05997 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC18.33■□□□□ 0.52
COL5A2P05997 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL5A2P05997 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.33■□□□□ 0.52
COL5A2P05997 AL139424.3-202ENST00000641619 917 ntBASIC18.33■□□□□ 0.52
COL5A2P05997 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms