Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.68□□□□□ -0.22
MT-ND1P03886 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 AC114812.1-204ENST00000449669 728 ntBASIC13.68□□□□□ -0.22
MT-ND1P03886 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.68□□□□□ -0.22
MT-ND1P03886 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.68□□□□□ -0.22
MT-ND1P03886 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.68□□□□□ -0.22
MT-ND1P03886 SORD2P-201ENST00000558556 1069 ntBASIC13.68□□□□□ -0.22
MT-ND1P03886 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.68□□□□□ -0.22
MT-ND1P03886 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.68□□□□□ -0.22
MT-ND1P03886 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 AL603764.1-201ENST00000636452 321 ntBASIC13.68□□□□□ -0.22
MT-ND1P03886 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MT-ND1P03886 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.68□□□□□ -0.22
MT-ND1P03886 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AC139712.1-201ENST00000378256 1875 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 AP002761.4-201ENST00000565433 3361 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.67□□□□□ -0.22
MT-ND1P03886 KLF2P2-201ENST00000416807 1039 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.67□□□□□ -0.22
MT-ND1P03886 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 INGX-202ENST00000489074 768 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 GCOM2-201ENST00000509133 1104 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AC103988.2-201ENST00000561804 725 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 AC124283.3-201ENST00000570869 594 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.67□□□□□ -0.22
MT-ND1P03886 KHSRPP1-201ENST00000427983 1768 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AC102953.2-201ENST00000609755 3026 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AC020910.5-201ENST00000623668 1865 ntBASIC13.67□□□□□ -0.22
MT-ND1P03886 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.67□□□□□ -0.22
MT-ND1P03886 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MT-ND1P03886 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
MT-ND1P03886 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
MT-ND1P03886 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 AL138725.1-201ENST00000407347 1314 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 AL022313.4-201ENST00000562756 2046 ntBASIC13.66□□□□□ -0.22
MT-ND1P03886 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MT-ND1P03886 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms