Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HLA-AP01891 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-AP01891 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-AP01891 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-AP01891 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-AP01891 AC009474.1-201ENST00000455096 1565 ntBASIC12.26□□□□□ -0.45
HLA-AP01891 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-AP01891 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.25□□□□□ -0.45
HLA-AP01891 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
HLA-AP01891 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-AP01891 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 AC092580.3-201ENST00000430932 139 ntBASIC12.25□□□□□ -0.45
HLA-AP01891 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-AP01891 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-AP01891 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.25□□□□□ -0.45
HLA-AP01891 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.25□□□□□ -0.45
HLA-AP01891 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HLA-AP01891 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HLA-AP01891 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-AP01891 AC015911.4-201ENST00000588022 1070 ntBASIC12.25□□□□□ -0.45
HLA-AP01891 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-AP01891 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 MRPL37P1-201ENST00000592451 1337 ntBASIC12.25□□□□□ -0.45
HLA-AP01891 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 AC024075.2-201ENST00000598112 1473 ntBASIC12.25□□□□□ -0.45
HLA-AP01891 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
HLA-AP01891 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HLA-AP01891 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HLA-AP01891 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-AP01891 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
HLA-AP01891 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HLA-AP01891 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HLA-AP01891 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HLA-AP01891 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HLA-AP01891 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HLA-AP01891 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-AP01891 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-AP01891 AL391647.1-201ENST00000395664 511 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms