Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NPHP4O75161 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPHP4O75161 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.58■□□□□ 0.73
NPHP4O75161 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.58■□□□□ 0.73
NPHP4O75161 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPHP4O75161 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPHP4O75161 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPHP4O75161 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPHP4O75161 AL031590.1-202ENST00000641466 1737 ntBASIC19.58■□□□□ 0.73
NPHP4O75161 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPHP4O75161 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPHP4O75161 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.58■□□□□ 0.72
NPHP4O75161 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NPHP4O75161 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.58■□□□□ 0.72
NPHP4O75161 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
NPHP4O75161 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 RBP4-203ENST00000371469 814 ntTSL 5 BASIC19.58■□□□□ 0.72
NPHP4O75161 HMGA1P1-201ENST00000415560 1062 ntBASIC19.58■□□□□ 0.72
NPHP4O75161 AC004910.1-201ENST00000433493 787 ntBASIC19.58■□□□□ 0.72
NPHP4O75161 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC19.58■□□□□ 0.72
NPHP4O75161 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC19.58■□□□□ 0.72
NPHP4O75161 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC19.58■□□□□ 0.72
NPHP4O75161 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC19.58■□□□□ 0.72
NPHP4O75161 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC19.58■□□□□ 0.72
NPHP4O75161 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC19.58■□□□□ 0.72
NPHP4O75161 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC19.58■□□□□ 0.72
NPHP4O75161 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC19.58■□□□□ 0.72
NPHP4O75161 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPHP4O75161 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NPHP4O75161 STK16-202ENST00000409260 1493 ntTSL 5 BASIC19.58■□□□□ 0.72
NPHP4O75161 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.57■□□□□ 0.72
NPHP4O75161 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.57■□□□□ 0.72
NPHP4O75161 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.57■□□□□ 0.72
NPHP4O75161 SFPQP1-201ENST00000446621 1786 ntBASIC19.57■□□□□ 0.72
NPHP4O75161 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.57■□□□□ 0.72
NPHP4O75161 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC19.57■□□□□ 0.72
NPHP4O75161 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
NPHP4O75161 DDC-204ENST00000426377 1700 ntTSL 3 BASIC19.57■□□□□ 0.72
NPHP4O75161 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 MIR181D-201ENST00000384853 137 ntBASIC19.57■□□□□ 0.72
NPHP4O75161 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NPHP4O75161 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC19.57■□□□□ 0.72
NPHP4O75161 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC19.57■□□□□ 0.72
NPHP4O75161 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC19.57■□□□□ 0.72
NPHP4O75161 AC079331.1-201ENST00000623200 1200 ntBASIC19.57■□□□□ 0.72
NPHP4O75161 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.57■□□□□ 0.72
NPHP4O75161 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPHP4O75161 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NPHP4O75161 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.56■□□□□ 0.72
NPHP4O75161 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NPHP4O75161 AL590824.1-201ENST00000403828 1349 ntBASIC19.56■□□□□ 0.72
NPHP4O75161 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.56■□□□□ 0.72
NPHP4O75161 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NPHP4O75161 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC19.56■□□□□ 0.72
NPHP4O75161 RBPMSLP-201ENST00000433427 502 ntBASIC19.56■□□□□ 0.72
NPHP4O75161 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC19.56■□□□□ 0.72
NPHP4O75161 AC099343.1-201ENST00000513481 609 ntBASIC19.56■□□□□ 0.72
NPHP4O75161 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
NPHP4O75161 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC19.56■□□□□ 0.72
NPHP4O75161 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NPHP4O75161 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC19.56■□□□□ 0.72
NPHP4O75161 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC19.56■□□□□ 0.72
NPHP4O75161 AC091691.1-201ENST00000583587 1018 ntBASIC19.56■□□□□ 0.72
NPHP4O75161 AC008622.3-201ENST00000621170 600 ntBASIC19.56■□□□□ 0.72
NPHP4O75161 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.56■□□□□ 0.72
NPHP4O75161 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC19.56■□□□□ 0.72
NPHP4O75161 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPHP4O75161 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms