Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.55□□□□□ -0.08
KDELR3O43731 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KDELR3O43731 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.55□□□□□ -0.08
KDELR3O43731 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.55□□□□□ -0.08
KDELR3O43731 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
KDELR3O43731 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KDELR3O43731 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.55□□□□□ -0.08
KDELR3O43731 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.55□□□□□ -0.08
KDELR3O43731 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.55□□□□□ -0.08
KDELR3O43731 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
KDELR3O43731 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KDELR3O43731 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 OR8T1P-201ENST00000421347 918 ntBASIC14.54□□□□□ -0.08
KDELR3O43731 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.54□□□□□ -0.08
KDELR3O43731 RPSAP15-201ENST00000448168 861 ntBASIC14.54□□□□□ -0.08
KDELR3O43731 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.54□□□□□ -0.08
KDELR3O43731 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.54□□□□□ -0.08
KDELR3O43731 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 CHMP4BP1-201ENST00000556017 588 ntBASIC14.54□□□□□ -0.08
KDELR3O43731 AC242376.1-201ENST00000559033 726 ntBASIC14.54□□□□□ -0.08
KDELR3O43731 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.54□□□□□ -0.08
KDELR3O43731 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 AL590824.1-201ENST00000403828 1349 ntBASIC14.54□□□□□ -0.08
KDELR3O43731 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.54□□□□□ -0.08
KDELR3O43731 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.54□□□□□ -0.08
KDELR3O43731 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 AC067750.1-201ENST00000608826 6545 ntBASIC14.54□□□□□ -0.08
KDELR3O43731 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.54□□□□□ -0.08
KDELR3O43731 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.54□□□□□ -0.08
KDELR3O43731 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KDELR3O43731 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.53□□□□□ -0.08
KDELR3O43731 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.53□□□□□ -0.08
KDELR3O43731 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.53□□□□□ -0.08
KDELR3O43731 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.53□□□□□ -0.08
KDELR3O43731 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KDELR3O43731 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.53□□□□□ -0.08
KDELR3O43731 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.53□□□□□ -0.08
KDELR3O43731 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.53□□□□□ -0.08
KDELR3O43731 AC116345.2-201ENST00000512837 523 ntBASIC14.53□□□□□ -0.08
KDELR3O43731 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.53□□□□□ -0.08
KDELR3O43731 RTN3P1-201ENST00000536295 711 ntBASIC14.53□□□□□ -0.08
KDELR3O43731 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms