Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CHMP2AO43633 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.21■□□□□ 0.19
CHMP2AO43633 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP2AO43633 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.21■□□□□ 0.19
CHMP2AO43633 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 FGFR3P5-201ENST00000564496 886 ntBASIC16.21■□□□□ 0.19
CHMP2AO43633 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP2AO43633 MEG3_2.1-201ENST00000611456 105 ntBASIC16.21■□□□□ 0.19
CHMP2AO43633 AL591471.1-201ENST00000621855 229 ntBASIC16.21■□□□□ 0.19
CHMP2AO43633 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHMP2AO43633 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CHMP2AO43633 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP2AO43633 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CHMP2AO43633 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP2AO43633 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.21■□□□□ 0.18
CHMP2AO43633 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CHMP2AO43633 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
CHMP2AO43633 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.21■□□□□ 0.18
CHMP2AO43633 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
CHMP2AO43633 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP2AO43633 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP2AO43633 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.2■□□□□ 0.18
CHMP2AO43633 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 AL161670.2-201ENST00000557650 1227 ntBASIC16.2■□□□□ 0.18
CHMP2AO43633 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP2AO43633 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP2AO43633 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP2AO43633 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP2AO43633 AC104506.1-201ENST00000609247 429 ntBASIC16.2■□□□□ 0.18
CHMP2AO43633 AC091812.3-201ENST00000621362 345 ntBASIC16.2■□□□□ 0.18
CHMP2AO43633 AC090386.2-201ENST00000623010 1039 ntBASIC16.2■□□□□ 0.18
CHMP2AO43633 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 AL009178.2-201ENST00000597278 2719 ntBASIC16.2■□□□□ 0.18
CHMP2AO43633 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHMP2AO43633 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP2AO43633 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP2AO43633 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP2AO43633 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP2AO43633 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHMP2AO43633 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP2AO43633 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms