Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 AP005019.2-201ENST00000615104 511 ntBASIC12.38□□□□□ -0.43
TMEM235A6NFC5 AL390754.1-201ENST00000619088 582 ntBASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 AC092053.3-201ENST00000641308 4975 ntBASIC12.38□□□□□ -0.43
TMEM235A6NFC5 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.38□□□□□ -0.43
TMEM235A6NFC5 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 SPDYE19P-201ENST00000338590 713 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 SOCS2P1-201ENST00000417727 557 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AP000347.1-202ENST00000435868 847 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 DNAJB3-202ENST00000449667 1266 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RRP7BP-205ENST00000566851 833 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 BAP1-211ENST00000615113 489 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.37□□□□□ -0.43
TMEM235A6NFC5 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM235A6NFC5 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms