Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AC241585.1-201ENST00000433527 519 ntBASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AL161932.2-201ENST00000435436 679 ntBASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 DUX4L27-201ENST00000554796 1261 ntBASIC15.46■□□□□ 0.07
CTAGE9A4FU28 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AC120045.2-201ENST00000567334 178 ntBASIC15.46■□□□□ 0.07
CTAGE9A4FU28 BX088702.1-201ENST00000610784 235 ntBASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.46■□□□□ 0.07
CTAGE9A4FU28 AL445250.1-201ENST00000641671 2259 ntBASIC15.46■□□□□ 0.06
CTAGE9A4FU28 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CTAGE9A4FU28 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 INTS4P2-202ENST00000614726 2019 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 SPDYE18-201ENST00000510091 1050 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC027237.1-201ENST00000560942 655 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC005586.2-201ENST00000563946 837 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 BRI3BPP1-201ENST00000594224 787 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC138696.2-201ENST00000607376 223 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC104506.1-201ENST00000609247 429 ntBASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.45■□□□□ 0.06
CTAGE9A4FU28 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms