Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AC245100.3-201ENST00000441281 285 ntBASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AC079316.1-201ENST00000548397 411 ntBASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AL158070.2-201ENST00000623713 1621 ntBASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AL157414.3-201ENST00000624276 1954 ntBASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 AHCYP2-201ENST00000430630 1300 ntBASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX49Q9Y6V7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AC019294.4-201ENST00000561777 2905 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 Z82170.1-201ENST00000625081 3192 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 NUTM2HP-201ENST00000442076 2498 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 FAM90A12P-201ENST00000519497 2375 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 FAM90A24P-201ENST00000520792 2369 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 GPAA1P2-201ENST00000417923 928 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AC104306.2-201ENST00000451877 341 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 RNA5SP486-201ENST00000515961 83 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AP006547.1-201ENST00000563435 692 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AC005695.3-201ENST00000614522 232 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 AL360270.3-201ENST00000609118 1348 ntBASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX49Q9Y6V7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX49Q9Y6V7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms