Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPBQ9Y5S2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPBQ9Y5S2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 DPY19L2P4-201ENST00000479881 442 ntBASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 AC233724.9-201ENST00000511694 407 ntBASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 AP000920.1-201ENST00000531824 344 ntBASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPBQ9Y5S2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 AC010900.1-201ENST00000449849 1296 ntBASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 RPL29P2-201ENST00000488409 460 ntBASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 AC009041.4-201ENST00000620075 638 ntBASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 AC011477.7-201ENST00000617163 1440 ntBASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDC42BPBQ9Y5S2 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 SNRPD2P2-201ENST00000473818 333 ntBASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 CICP16-201ENST00000502609 2813 ntBASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 PTN-202ENST00000393083 1599 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 RCC2P5-201ENST00000492126 1487 ntBASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 AC106782.5-201ENST00000616011 337 ntBASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC20.92■□□□□ 0.94
CDC42BPBQ9Y5S2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms