Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 AC004623.1-201ENST00000624592 2127 ntBASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
AP4S1Q9Y587 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AL022323.5-201ENST00000624101 2059 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ABCD1P2-201ENST00000429313 1601 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 MEIS3P1-201ENST00000495167 958 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 MTDHP5-201ENST00000598980 586 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AL391069.4-201ENST00000609583 481 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AP001059.3-201ENST00000619053 235 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AC009093.7-201ENST00000623853 1223 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AC026271.4-201ENST00000578214 1833 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP4S1Q9Y587 AC060814.4-201ENST00000594169 2163 ntBASIC13.68□□□□□ -0.22
AP4S1Q9Y587 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP4S1Q9Y587 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms