Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRCH1Q9Y2L9 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 AC069335.1-201ENST00000489972 472 ntBASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 ABCD1P2-201ENST00000429313 1601 ntBASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.78□□□□□ -0.2
LRCH1Q9Y2L9 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRCH1Q9Y2L9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 FAM220BP-201ENST00000377689 816 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms