Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.89□□□□□ -0.35
VRK1Q99986 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 OR10B1P-201ENST00000601666 907 ntBASIC12.89□□□□□ -0.35
VRK1Q99986 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
VRK1Q99986 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.89□□□□□ -0.35
VRK1Q99986 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 Z82170.1-201ENST00000625081 3192 ntBASIC12.89□□□□□ -0.35
VRK1Q99986 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.89□□□□□ -0.35
VRK1Q99986 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
VRK1Q99986 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VRK1Q99986 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 AC105206.1-202ENST00000314927 2368 ntBASIC12.88□□□□□ -0.35
VRK1Q99986 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 AC104306.2-201ENST00000451877 341 ntBASIC12.88□□□□□ -0.35
VRK1Q99986 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 AC099548.2-209ENST00000480264 625 ntBASIC12.88□□□□□ -0.35
VRK1Q99986 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 FAM86HP-204ENST00000513466 959 ntBASIC12.88□□□□□ -0.35
VRK1Q99986 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.88□□□□□ -0.35
VRK1Q99986 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.88□□□□□ -0.35
VRK1Q99986 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.88□□□□□ -0.35
VRK1Q99986 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.88□□□□□ -0.35
VRK1Q99986 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
VRK1Q99986 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VRK1Q99986 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VRK1Q99986 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
VRK1Q99986 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VRK1Q99986 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 AC020907.1-201ENST00000616460 1350 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms