Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AK2P2-201ENST00000439142 405 ntBASIC11.77□□□□□ -0.53
RAB40CQ96S21 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 IGHV3-42-201ENST00000520410 361 ntBASIC11.77□□□□□ -0.53
RAB40CQ96S21 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 DUX4L27-201ENST00000554796 1261 ntBASIC11.77□□□□□ -0.53
RAB40CQ96S21 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AL844908.2-201ENST00000609461 460 ntBASIC11.77□□□□□ -0.53
RAB40CQ96S21 AL662799.1-202ENST00000614205 422 ntBASIC11.77□□□□□ -0.53
RAB40CQ96S21 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.77□□□□□ -0.53
RAB40CQ96S21 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
RAB40CQ96S21 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB40CQ96S21 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 POM121L14P-201ENST00000406100 1558 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AL590440.2-201ENST00000641973 1595 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 KLF2P2-201ENST00000416807 1039 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 EIF3FP3-201ENST00000434851 1086 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AC005586.2-201ENST00000563946 837 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AC106028.4-201ENST00000614509 607 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 AC004840.1-201ENST00000636359 365 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 CR383656.2-201ENST00000548656 2254 ntBASIC11.76□□□□□ -0.53
RAB40CQ96S21 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RAB40CQ96S21 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB40CQ96S21 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms