Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 FO393414.2-201ENST00000405153 598 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SLED1-202ENST00000512051 380 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SLC25A1P1-201ENST00000528351 927 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 RARRES2P8-201ENST00000566335 367 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC140113.2-201ENST00000604370 208 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC004840.1-201ENST00000636359 365 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC002350.2-201ENST00000623894 1828 ntBASIC13.63□□□□□ -0.23
NR1H4Q96RI1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC023274.1-201ENST00000418278 595 ntBASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AL671277.1-201ENST00000429656 993 ntBASIC13.63□□□□□ -0.23
NR1H4Q96RI1 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC099522.2-201ENST00000607001 744 ntBASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AC027601.4-201ENST00000611259 610 ntBASIC13.63□□□□□ -0.23
NR1H4Q96RI1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NR1H4Q96RI1 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NR1H4Q96RI1 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms