Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHAMP1Q96JM3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PIN1P1-201ENST00000412108 996 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 RPS2P32-201ENST00000439199 892 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 AC012441.1-201ENST00000446669 685 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 MIR5189-201ENST00000577370 114 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 AC017083.2-201ENST00000608069 979 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 AC009118.2-201ENST00000613275 655 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 AL033527.5-201ENST00000641382 801 ntBASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
CHAMP1Q96JM3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 BAATP1-201ENST00000412284 1225 ntBASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 CICP12-201ENST00000455801 843 ntBASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 AC027237.1-201ENST00000560942 655 ntBASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 OR10B1P-201ENST00000601666 907 ntBASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 AC004233.3-201ENST00000607794 1269 ntBASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHAMP1Q96JM3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms