Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 Z98259.2-201ENST00000641583 609 ntBASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.88■□□□□ 0.29
SMARCC2Q8TAQ2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AL365209.1-201ENST00000624418 6473 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 USP17L6P-201ENST00000382470 1197 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 NKAIN1P1-201ENST00000435754 582 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC012441.2-201ENST00000444843 739 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC106794.1-201ENST00000506935 792 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 BNIP3P13-201ENST00000599968 566 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC022748.3-201ENST00000621828 275 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC004899.1-201ENST00000424687 1714 ntBASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMARCC2Q8TAQ2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 EIF4HP1-201ENST00000453115 687 ntBASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 RN7SL163P-201ENST00000583100 276 ntBASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 AC009884.2-201ENST00000603110 324 ntBASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 AC004923.1-202ENST00000642106 209 ntBASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms