Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FAM207CP-201ENST00000443486 507 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC092183.1-201ENST00000469884 875 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 MIR6074-201ENST00000612054 107 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AJ011932.1-201ENST00000621707 465 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC005252.2-201ENST00000624630 1141 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC004241.5-201ENST00000623870 2448 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 LINC02486-201ENST00000604157 3000 ntBASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.8□□□□□ -0.36
DNAAF1Q8NEP3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AC090114.2-201ENST00000608477 7054 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AL445209.1-201ENST00000607269 3491 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AL162726.2-201ENST00000438986 1017 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 MYCLP2-201ENST00000449268 967 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AL132655.2-201ENST00000596276 594 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AC004466.1-201ENST00000599515 1080 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AC004233.3-201ENST00000607794 1269 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AC068760.1-201ENST00000493579 1953 ntBASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DNAAF1Q8NEP3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms