Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 AP000812.2-201ENST00000538934 718 ntBASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 AC005225.4-201ENST00000557330 545 ntBASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 C2orf69P2-201ENST00000562032 1123 ntBASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF439Q8NDP4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 KRT17P7-201ENST00000451704 1104 ntBASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 COX20P2-201ENST00000452636 358 ntBASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 AC008825.2-201ENST00000603374 718 ntBASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 AL358472.3-201ENST00000608147 415 ntBASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 RHOXF1P1-202ENST00000635473 501 ntBASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF439Q8NDP4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.02□□□□□ -0.48
ZNF439Q8NDP4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.02□□□□□ -0.48
ZNF439Q8NDP4 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF439Q8NDP4 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF439Q8NDP4 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms